Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908841.1_cds_XP_016459026.1_52607
CDS Infomation

[gene=LOC107782646] [db_xref=GeneID:107782646] [protein=PHD finger protein At2g01810-like] [protein_id=XP_016459026.1] [location=join(94317..94614,94752..95001,95204..96824,96968..97039)] [gbkey=CDS]
Sequence

ATGGCTTCATCCACCATTATTGAAGCCTGTAAGAGTAGAAAGAGAAACCGAAAGCCATTT
GTATTTGAAACATTCGCAACAGGAAACTCCATTGACGGTTTTTCAGGACCTTTTAAAGAC
AATATCCGAATGTTCCTCCAAGAATTTTCTAATATTGAAGATTACACTGTCTCTGGTTTT
CCAATTTGGTCCACTTGGTTGATTTCTAACTCAACCGGTGCAGTTTTCCCACTCTACACC
ATTGAAGAAACCACTCAACACTCTCTTCAACCTTTCTGTGATCACTGCAAATTTTTTGGA
TGGGGTCACCATTATGTGTCAAATAGAAGGTACCATTTGGTAATACCGGCAAATGAGAAC
TGGGAAAAGCCATTGGGAAGCGATTCTTTTGAAATCAGTACTCACGTTTTGCATGGTTTG
ATTCATTGCAATGGTTATGGCCATTTGGTGTCCATTAATAATGGCGTTGTTAAAGGGGAT
TCAAATTTGCTCTCTGGAACTGATTTCATGGATTTCTGGGATCGTCTATGTACTATCTTC
AAAACCAGGAAAATTTCAGTGAATGATGTGTCAAAGAAGAGAGATATGGATTTGAGGTTG
CTTCATGGTGTTGCATATGGACAATCCTGGTTTGGGAAATGGGATTACAGATTTGGACGT
GGAAGCTATGGAGTGACAGAGCAGAAATATGAAATTGCTGTTCAATTCCTAAGCTCATTA
GGACTTGATAAGATTTTGAATGATTTCAAAAAGGATAATCCGAAAAGACTGAAAATCAAG
CAGATTATCGGTACCTACAGAGAATTGAGTGAAGTTCCATTGATCACAATCAGTGACTTG
TTTCAATTCATGCTTGCTTTTAAGTCTAAAGCTCCATTTCATAGTAAAAAGAAGCTTGAA
AATAGTGATGATTATTGGTGTGATCCTGATATAGGAGAGAAAAATAGGCCAATTAGTATG
GATACATTTGTGAATTTGATGGCTAACAATGATTGTAGATGGCCTGCTAGAAGGCTAGAA
TTTGTGCTAATAGTGATTGTGAATTTGCTGAAAGAAAATCAAGAAAATGTGAACAGAAAT
TATGGGATGACAAGGCAGGACTTGAGAGATGAGGCAAGAAAATGCATTGGTGACACTGGT
TTGATTGATTTTGTGCTGAAATCTATCAGATGTTTTCAATTGGGAAACCAAATTATTCGT
CGGTCTATTAACCCAAATACTAAGTTATTAGAATTCACCATCCATGAAGCTGCTAATAAG
GAAGCAGAACCAATAAGGTTTCAATTGTTGGACAAGGATTCTGATTGCAGGTGGACTGAG
AGAAAGGTGAAAAAAGCTGCGGAGTTCATTTTGAAAATCTTGAGAGCACACAATGGTGAT
GGTGCAATGTCTAGGCAGGAGCTGCGTGACAAAGCTAGGACAATTATCCGTGACACCGGG
CTGATTGATTACGTGCTGAAATCCATTAACAAATCCATGTTGGGAAACAAGATCATTTTT
CGATCAAAAAACCCGTCTACTAAAAGAATTGAATTTGCATTTGAAGATATTGTTGATGCA
AGCAGAGTTGACAACATTGAGTTAGACTTCAATATTGATCAAGATCTTGAGTACTTGTAT
GAAACAGTGCTTTTGAGTTACCCAGGATCAGACTCAGTGAGTTTGGCTACTCGGGTTGTC
TTGGACAGCAAGAAATTTGTTAAAAAGTGGAAGCTTGAGAATCAAGAAAGCCAAATAATG
GCATTAACATGTAAAGTCTTGCCGAGTTTCGACGAGTTAGAGAGTGAGTTGACTCGGCCA
TTGTCACCTGGTGTGGTTGTATTTGTTCCTCCTTGGATTACAATACGTGAGCTTAAGGGG
GTGGCACAATTTGCATTAAGGGATACTTATTGCATAATGCAAAACTTTGTAGTAACACAA
ATTGGTGGTTTGAAAGGAATAGAGGATAAAAGGATGCTATCTTGCGCAGTGGGCAGAGAT
GCACACGTTTGGGTTAGAGGGCGTGGGCTGGACTTGGATACTGAACTGAGGTATGAAGGT
GGGCCCATAAAGTTAAAGGTGGATTGCATTTGTGGGGCCAGGGATGATGATGGGGAGAGA
ATGGTAAATTGTGATGCTTGCCAAGTATGGTTCCACACAGTGTGCACAGGCATTGATGAT
CATGAGGAGGGTGCAGCTTGTCCTGTTATCACTCACGCGCAGTGGAGAACTGAAGAACCT
GAACTGGTGTTTAGTAGGTGA

Peptide Sequence

PEP ID

XP_016459026.1
PEP Infomation

PREDICTED: PHD finger protein At2g01810-like [Nicotiana tabacum]
Sequence

MASSTIIEACKSRKRNRKPFVFETFATGNSIDGFSGPFKDNIRMFLQEFSNIEDYTVSGF
PIWSTWLISNSTGAVFPLYTIEETTQHSLQPFCDHCKFFGWGHHYVSNRRYHLVIPANEN
WEKPLGSDSFEISTHVLHGLIHCNGYGHLVSINNGVVKGDSNLLSGTDFMDFWDRLCTIF
KTRKISVNDVSKKRDMDLRLLHGVAYGQSWFGKWDYRFGRGSYGVTEQKYEIAVQFLSSL
GLDKILNDFKKDNPKRLKIKQIIGTYRELSEVPLITISDLFQFMLAFKSKAPFHSKKKLE
NSDDYWCDPDIGEKNRPISMDTFVNLMANNDCRWPARRLEFVLIVIVNLLKENQENVNRN
YGMTRQDLRDEARKCIGDTGLIDFVLKSIRCFQLGNQIIRRSINPNTKLLEFTIHEAANK
EAEPIRFQLLDKDSDCRWTERKVKKAAEFILKILRAHNGDGAMSRQELRDKARTIIRDTG
LIDYVLKSINKSMLGNKIIFRSKNPSTKRIEFAFEDIVDASRVDNIELDFNIDQDLEYLY
ETVLLSYPGSDSVSLATRVVLDSKKFVKKWKLENQESQIMALTCKVLPSFDELESELTRP
LSPGVVVFVPPWITIRELKGVAQFALRDTYCIMQNFVVTQIGGLKGIEDKRMLSCAVGRD
AHVWVRGRGLDLDTELRYEGGPIKLKVDCICGARDDDGERMVNCDACQVWFHTVCTGIDD
HEEGAACPVITHAQWRTEEPELVFSR

Transcript Sequence

Gene sequence data has not been registered.